In the near-future, the world's energy problems have been solved thanks to a scientific power known as the Manifestation Engine which provides energy from the sky. On the island of Izu Oshima, Akane Isshiki is living a simple life with her sister, Momo, and her grandfather and creator of the engine, Kenjirou. As Akane eagerly awaits the arrival of her classmate, Aoi Futaba, who is travelling to the nearby Blue Island for treatment, she and Momo hear an explosion coming from their home and discover that Kenjirou has somehow switched bodies with an inanimate ferret doll as the result of an experiment. Undeterred by his new form, Kenjirou gives Akane his latest invention, a strange key, in order for her to fight against a strange alien mech, known as an Alone, that is attacking Blue Island, where the Manifestation Engine is stored.